Let's face facts, not everyone wants a bare bottom tank. It is important for those that choose to have a substrate, or other forms of filtration (i.e. Miracle Mud, macros, etc) to understand their function and have appropriate husbandry. Proper set-up and maintenance is important. For example, Miracle Mud - the website shows how to set it up, and also recommends changing out 1/2 of the mud every couple of years (to go off of memory). I can also argue filter socks have their own issues....having a sock full of gunk is just as bad as having a rotting area of detritus in the tank....the husbandry is important.
On with the skimmer....I'll give a little info on how the skimmer actually removes the organic compounds. Dissolved Organic Compounds (DOCs) are removed by protein skimmers. DOCs are the result of biological materials that have broken down. They are a bipolar molecules.....which means they have at least one atom that likes water, and at least one atom that likes air. What happens is these molecules see the surface of the bubble and want to stick to it. So, you end up with a bubble that is covered in these. Picture a sticky lollipop and roll it around on the carpet....all the fibers that stick to the lollipop represent the DOCs stuck to the lollipop/bubble. As the bubbles rise to the top, more of the DOC accumulate together creating the foam that ends up in the cup. The longer the bubble remains in touch with the DOCs, the more will be removed. Think about the lollipop again, and the longer you roll it in the carpet, the more fibers will be stuck. Also, the longer the bubble is in contact with the DOCs the better chance less "sticky" molecules will have a chance to "stick". There are a number of things that skimmers remove beyond DOCs. Left over food, bacteria, planktons, trace elements, metabolites, volatile organic compounds (VOCs), and particulate organic compounds (POCs).
What are the different types of skimmers? Beckett , needlewheel/aspirating, downdraft, venturi injector, counter-current ...am I missing any?
What makes a skimmer work more efficiently.....height? Width? Flow rate?