'cooking' is a slang term for 'curing', so yeah, that's what he means.
When I did my rock, I just put them in a rubbermaid tub with an airstone and a powerhead, nothing else...
I did scrub the rocks down first with a soft-bristled toothbrush to remove the majority of any die-off that was present, and did a couple of waterchanges... one every two weeks (cured for a total of 6 wks).
Just make sure when you do your waterchange to churn everything up really good and blow out the rock to get any internal die-off out of the rocks... I was amazed at how much crud kept coming out even though I had cleaned them pretty well before putting them in.
Make sure and test the parameters every other day or so... will give you a good idea how quickly they're curing.
HTH.
[edit: oops... I guess that isn't what he means... but I'm pretty sure cooking is the same process as curing... after 5 years though I'm not sure if there's anything you have to worry about...]